Index

F

fail_missing_dependency() (in module phenotrex.util.helpers) fastas_to_grs() (in module phenotrex.transforms) feature_type (phenotrex.structure.records.GenotypeRecord attribute) (phenotrex.structure.records.TrainingRecord attribute)

features (phenotrex.structure.records.GenotypeRecord attribute) (phenotrex.structure.records.TrainingRecord attribute) fit() (phenotrex.transforms.resampling.TrainingRecordResampler method)

G

GenotypeRecord (class in phenotrex.structure.records) get_groups() (in module phenotrex.util.helpers) get_logger() (in module phenotrex.util.logging) get_resampled() (phenotrex.transforms.resampling.TrainingRecordResampler method)

get_x_y_tn_ft() (in module phenotrex.util.helpers) group_id (phenotrex.structure.records.GroupRecord attribute) group_name (phenotrex.structure.records.GroupRecord attribute) GroupRecord (class in phenotrex.structure.records)

I

identifier (phenotrex.structure.records.GenotypeRecord attribute) (phenotrex.structure.records.GroupRecord attribute) (phenotrex.structure.records.PhenotypeRecord attribute) (phenotrex.structure.records.TrainingRecord attribute)

M

module phenotrex phenotrex.cli phenotrex.ml.clf phenotrex.structure phenotrex.structure.records phenotrex.transforms phenotrex.transforms.resampling phenotrex.util phenotrex.util.helpers phenotrex.util.logging

P

phenotrex module phenotrex.cli module phenotrex.ml.clf module phenotrex.structure module phenotrex.structure.records module

phenotrex.transforms module phenotrex.transforms.resampling module phenotrex.util module phenotrex.util.helpers module phenotrex.util.logging module PhenotypeRecord (class in phenotrex.structure.records)

T

TrainingRecord (class in phenotrex.structure.records) TrainingRecordResampler (class in phenotrex.transforms.resampling)

trait_name (phenotrex.structure.records.PhenotypeRecord attribute) trait_sign (phenotrex.structure.records.PhenotypeRecord attribute)